ENCODE
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Project Overview – ENCODE
In September 2003, the NHGRI introduced the ENCODE project to facilitate the identification and analysis of the complete set of functional elements in the human genome sequence.
publications – ENCODE
The Encyclopedia of DNA Elements (ENCODE) project has established a genomic resource for mammalian development, profiling a diverse panel of mouse tissues at 8 developmental …
Access to ENCODE data
The Roadmap Epigenomics Mapping Consortium (Roadmap) was an NIH funded project comparable to ENCODE. The Roadmap metadata has been fully incorporated into this site, …
Getting Started – ENCODE
The ENCODE Portal, developed and maintained by the Data Coordination Center (ENCODE DCC), is the canonical source for all experimental metadata and data from ENCODE and …
ENCORE Matrix – ENCODE
The ENCORE project aims to study protein-RNA interactions by creating a map of RNA binding proteins (RBPs) encoded in the human genome and identifying the RNA elements that the …
Data – ENCODE
REST API Citing ENCODE FAQ Project Overview Collaborations ENCODE workshops About the DCC
Data Processing Pipelines – ENCODE
3D-chromatin pipelines such as HiC and ChIA-PET are assays that support the goal of ENCODE Project in mapping the organization of the human genome and to examine the spatial …
ENCODE Encyclopedia
The ENCODE Project aims to map all functional elements of the human and mouse genomes. Progress toward this goal has involved over ten thousand epigenomic experiments utilizing a …
Search – ENCODE
PRO-cap in peripheral blood mononuclear cell Homo sapiens peripheral blood mononuclear cell Lab: Haiyuan Yu, Cornell Project: ENCODE Library construction method: capped RNA …